Submissions from 2015


Hooked on Facebook: The Role of Social Anxiety and Need for Social Assurance in Problematic Use of Facebook, Roselyn J. Lee-Won, Leo Herzog, and Sung Gwan Park

Submissions from 2013


Automated Genome Annotation And Metabolic Model Reconstruction In The SEED And Model SEED, Scott Devoid, Ross Overbeek, Matthew DeJongh, Veronika Vonstein, Aaron A. Best, and Christopher Henry

Submissions from 2012


The Complexity of Pebbling in Diameter Two Graphs*, Charles A. Cusack, Timothy Lewis, Daniel Simpson, and Samuel Taggart


Evaluating the Consistency of Gene Sets Used in the Analysis of Bacterial Gene Expression Data, Nathan L. Tintle, Alexandra Sitarik, Benjamin Boerema, Kylie Young, Aaron Best, and Matthew DeJongh

Submissions from 2011


Connecting genotype to phenotype in the era of high-throughput sequencing, Aaron A. Best and Matthew DeJongh

CytoSEED: a Cytoscape Plugin for Viewing, Manipulating and Analyzing Metabolic Models Created by the Model SEED, Matthew DeJongh, Benjamin Bockstege, Paul Frybarger, Nicholas Hazekamp, Joshua Kammeraad, and Travis McGeehan

Increasing Engagement and Enrollment in Breadth-First Introductory Courses Using Authentic Computing Tasks, Ryan McFall and Matthew DeJongh


Inference of the Transcriptional Regulatory Network in Staphylococcus aureus by Integration of Experimental and Genomics-Based Evidence, Dmitry A. Ravcheev, Aaron A. Best, Nathan Tintle, Matthew DeJongh, Andrei L. Osterman, Pavel S. Novichkov, and Dmitry A. Rodionov

Submissions from 2010


High-throughput Generation, Optimization and Analysis of Genome-scale Metabolic Models, Christopher S. Henry, Matthew DeJongh, Aaron A. Best, Paul M. Frybarger, Ben Linsay, and Rick L. Stevens

Python on Symbian: Mobile App Development Made Easy, Pankaj Nathani, Bogdan Galiceanu, Hamish Willee, Marcelo Barros de Almeida, and Michael J. Jipping

Submissions from 2008


The RAST Server: Rapid Annotations using Subsystems Technology, Ramy Aziz, Daniela Bartels, Aaron A. Best, Matthew DeJongh, Terrence Disz, Robert Edwards, Kevin Formsma, Svetlana Gerdes, Elizabeth Glass, Michael Kubal, Folker Meyer, Gary Olsen, Robert Olson, Andrei Osterman, Ross Overbeek, Leslie McNeil, Daniel Paarman, Tobias Paczian, Bruce Parello, Gordon Pusch, Claudia Reich, Rick Stevens, Olga Vassieva, Veronika Vonstein, Andreas Wilke, and Olga Zagnitko


Gene Set Analyses For Interpreting Microarray Experiments On Prokaryotic Organisms, Nathan Tintle, Aaron A. Best, Matthew DeJongh, Dirk Van Bruggen, Fred Heffron, Steffen Porwollik, and Ronald C. Taylor

Submissions from 2007

Models of Interdisciplinary Research and Service Learning at Hope College, Aaron Best, Matthew DeJongh, Amanda Barton, Jeff R. Brown, and Christopher C. Barney


Toward The Automated Generation Of Genome-scale Metabolic Networks In The SEED, Matthew DeJongh, Kevin Formsma, Paul Boillot, John Gould, Matthew Rycenga, and Aaron A. Best