Title

CytoSEED: a Cytoscape Plugin for Viewing, Manipulating and Analyzing Metabolic Models Created by the Model SEED

Document Type

Article

Publication Date

12-30-2011

Abstract

CytoSEED is a Cytoscape plugin for viewing, manipulating and analyzing metabolic models created using the Model SEED. The CytoSEED plugin enables users of the Model SEED to create informative visualizations of the reaction networks generated for their organisms of interest. These visualizations are useful for understanding organism-specific biochemistry and for highlighting the results of flux variability analysis experiments.

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